CDS

Accession Number TCMCG016C15151
gbkey CDS
Protein Id OMO75683.1
Location join(212487..212621,212744..212890,213636..213726,213829..213947,214243..214433,214535..214745,215733..215970,216059..216414,216615..216753,217308..217507,217660..218002,218195..218268,218347..218565,219441..219749,221097..221306,221665..221934,222431..222634,222815..222979)
Organism Corchorus capsularis
locus_tag CCACVL1_16107

Protein

Length 1206aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215142; BioSample:SAMN03290679;
db_source AWWV01010993.1
Definition hypothetical protein CCACVL1_16107 [Corchorus capsularis]
Locus_tag CCACVL1_16107

EGGNOG-MAPPER Annotation

COG_category J
Description ribosome biogenesis protein
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03009        [VIEW IN KEGG]
KEGG_ko ko:K14569        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03008        [VIEW IN KEGG]
map03008        [VIEW IN KEGG]
GOs GO:0000166        [VIEW IN EMBL-EBI]
GO:0000462        [VIEW IN EMBL-EBI]
GO:0000469        [VIEW IN EMBL-EBI]
GO:0000478        [VIEW IN EMBL-EBI]
GO:0000479        [VIEW IN EMBL-EBI]
GO:0001882        [VIEW IN EMBL-EBI]
GO:0001883        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0003924        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005525        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006364        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016072        [VIEW IN EMBL-EBI]
GO:0016462        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016817        [VIEW IN EMBL-EBI]
GO:0016818        [VIEW IN EMBL-EBI]
GO:0017076        [VIEW IN EMBL-EBI]
GO:0017111        [VIEW IN EMBL-EBI]
GO:0019001        [VIEW IN EMBL-EBI]
GO:0022613        [VIEW IN EMBL-EBI]
GO:0030490        [VIEW IN EMBL-EBI]
GO:0030515        [VIEW IN EMBL-EBI]
GO:0030684        [VIEW IN EMBL-EBI]
GO:0030686        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032549        [VIEW IN EMBL-EBI]
GO:0032550        [VIEW IN EMBL-EBI]
GO:0032553        [VIEW IN EMBL-EBI]
GO:0032555        [VIEW IN EMBL-EBI]
GO:0032561        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034470        [VIEW IN EMBL-EBI]
GO:0034511        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0035639        [VIEW IN EMBL-EBI]
GO:0036094        [VIEW IN EMBL-EBI]
GO:0042254        [VIEW IN EMBL-EBI]
GO:0042274        [VIEW IN EMBL-EBI]
GO:0043167        [VIEW IN EMBL-EBI]
GO:0043168        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090305        [VIEW IN EMBL-EBI]
GO:0090501        [VIEW IN EMBL-EBI]
GO:0090502        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0097367        [VIEW IN EMBL-EBI]
GO:1901265        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCCACAGATAGTGGCGCCAATGAGCAGTCGCACAAGTCTCACCGCTCTCGTCAGTCGGGCGCCTCTGCTAAAAAGAAATCCAAAGACAAAAACAAGAACCAAAACTCCGACCCGAAGCAGCAAAACCCCAAGGCATTCGCTTTTCGTTCCAATGCAAAAGCAAAGAGATTGCAATCACGTGCTGTTGAGAAAGAGCAGCGTAAGCTTCATCTTCCTGTTATTGATCGATCCTATGGCGAACCACCTCCCTTTGTCGTTGTCGTGCAGGGCCCTCCTCAGGTTGGGAAGTCTCTTGTAATAAAGTCTCTCGTTAAGCATTATACGAAGCATAATTTACCAGAGGTTCGGGGACCAATTACCATTGTCTCAGGCAAGCAACGGCGCCTGCAGTTTGTTGAGTGTCCAAATGATATCAATGGCATGATTGATGCTGCAAAGTTTGCCGATCTTGCATTGCTTCTCATAGATGGAAGTTATGGCTTTGAGATGGAAACATTTGAATTCCTTAACATATTGCAAGTTCATGGGTTCCCAAAGGTGATGGGAGTTCTGACTCACCTTGATAAATTTAAGGATGTGAAGAAACTAAAGAAAACAAAACAGCGTCTTAAGCATCGTTTTTGGACAGAAATATATGATGGAGCGAAATTGTTTTATTTGTCTGGTCTCATCCATGGGAAGTATCCAAAGCGGGAAATTCATAATCTTGCAAGGTTTATCTCTGTTATGAAGTTCCCTCCCCTGTCTTGGAGAGTTTCTCATCCTTATATTTTGGTTGATCGTCTTGAAGATGTTACTCCCCCTGACAGAGTGCAAAAGAATAATAAATGTGATAGAAATATCACACTTTATGGTTATTTGCGGGGTTGTAATTTGAAAAGGGGAACTAAGGTCCATATTGCTGGTGTTGGAGACTTTAGCTTAGCTGGTGTTACAGGCCTATCTGATCCTTGTCCTTTACCATCAGCTGCCAAAAAGAAGGGATTACGTGACAAAGAAAAACTTTTTTATGCCCCCATGTCAGGACTTGGGGACCTGTTGTATGACAAAGATGCAGTCTACATAAATATTAATGACCATTTGGTTCAGTATTCTAAAGTTGATGAAATGGACGGAACAACACGTAAAGGGAAGGAACGAGATGTTGGGGAGGCCTTGGTGAAATCACTTCAGAATATAAAGAACCCAATCGATGAGAAGCTAGAAAAGAGCAAAATTTCCCTTTTTAGGCAGAATCCTAATGGCTCATTGGAAATTGAAGTTGGTGAAAAGGATTCTGACGAAGCACCAGAGCATGTCCGTCATATAGAGCCTATCGAGGAATACCAGCCCGGTAAAGATGGTTCTGCTGACAGTGATTTGGATGGATCAATGTCGTCAGATCAAGATGATGGTGTTCAGGAAGAGGCAATGCTGAAAAGTGAAGGTAGCGATACTGATGAAGAAACTACTGCATCAGAGCAACCGGGTCAAATTGTGGAACAGGGTATGAATGAAGAAAGTGCAGATGATGAAGAAGATGAACCAGATGGAACTTACGAAGATGATGGAAGCAATGAAGACACCCAGTCCATTTCAGGTTCGGAGTTTTCAGATGGTGACAACGAGGATCTGAATTCCGATGATGGTGGCCTAGGAAATATATCAAAGTGGAAAACGTCGTTGCTGGAAAGGGCAGCGAAGAAACAAAATATAAATCTCATGCAGCTTGTATATGGGAAATCTTCATCAACATCAAATACTTCTCACGAAGTGCAGGATGATAGTGAGAATGAAGGGAGTGATGATGATGAATTTTTTAAGCCAAAAGGAGAATGGAAGAAGAATTTGAAAGAAGGGTTAGACACTGATAATATCAATGCTGAGGACTGTTCTAAATCCACAAATTATTTAGAACTTAAGAACTGGAAAGAGGAAGAAGTGTATAAGAGTGTTCGAAATCGTTTTGTCACTGGTGATTGGTCAAAAGGAGCTCTCAGGAATCAATTGTCGCAATCTAAAACTGAAGAAGAGGATGAAGATGTGTATGGTGACTTTGAAGATTTGGAAACTGGGGAGAAGTACGAGACTCATCAGAATGATGATGCAAGCCAAAAGGAAGATGATGCAAGCCACAAGGAAGATGATGCTGCTAATGAGGAGCGGAAGATGAAAAAACTAGCGCGCCAAGAGGAAACTGATACAAAAAATGGGGTAAAAAATGACAGAAGTCAAGCAAATGCCAGTGAATATTATGACAAGTTGAAAGAAGAGATTGAACTCCAGAAACAAATGAATATAGCAGAACTCAATGATCTTGATGAGGCTACTCGATTGGAAATTGAGGGGTTTCGAACAGGGATGTATCTAAGGTTGGAGGTTCATGATGTTCCCTTTGAGATGGTTGAATATTTTGATCCCTGCCATCCGATTTTGGTTGGAGGAATTGGTCTTGGTGAGGAGAATGTTGGATACATGCAGACAAGGCTAAAACGGCATAGATGGCACAAAAAAGTGCTGAAGACTAGAGATCCAATTATTGTGTCAATTGGATGGAGGCGTTACCAGACCACCCCTGTTTACGCCATTGAGGACCAGAATGGAAGGCATCGCATGCTCAAGTATACTCCGGAACATATGCATTGTCTTGCAATGTTTTGGGGCCCTCTTGCCCCGCCAAAGACTGGGGTGCTTGCAGTTCAGAATTTATCAAACAATCTGGTAATTTTTTTATTAATTTTAAATAATTTTCATGTTGAGATCTATTTCCTTGTGAAAAATATGGAGCAAGCATCATTTCGCATCATAGCAACAGGATATGTACTTGAGTCCAACCATGCAGCACGGATAGTGAAGAAAATTAAGCTGGTTGGTTACCCCTGTAAAATATTCAAGAAAACAGCCCTCATCAAGGACATGTTTACTTCAGATCTTGAAGTAGCTCGGTTTGAGGGTGCAGCAATTCGAACTGTCAGTGGGATCCGTGGGCAGGTGAAAAAGGCTGCTAAAGAAGAGATAGGTAATAAACCCAAAAAGAAGGGAGGGCAAGCTAGGGAAGGAATTGCCAGGTGCACCTTTGAGGACCGGATTCTGATGAGTGACATAGTCTTTTTGCGTGCATGGACTCAAGTTGAAGTTCCCCAATTCTACAATCCATTAACTACTTCATTGCAACCTCGTCAAAAGACCTGGCAAGGAATGAAAACTGTGGCGGAATTGAGGAGGGAACACAATCTTCCTATTCCTGTTAATAAGGATTCGCTCTACAAGCCAATTGAGAGAAAGCCAAGGAAGTTCAATCCACTGGTCATTCCTAAGGCATTGCAGGCAAATCTTCCATTTGCATCAAAGCCCAAGGACATACCTAGTCGGAAACGGCCGCTTCTTGAAGATAGAAGAGCTGTTGTCATGGAGCCTCATGAACGAAAAGTTCATGCTCTTGTTCAACATCTTCAATTAATTAGGAGCGACAAGATGAAGAAGCGAAAGCTCAAGGAGGAGCAAAAAAGGAAACAACTCGAGGCACAGAGAGCTAAGGATGAGCAGGTCTTAAGAAAGCGGCGAAGAGAAGAGAGGCAGGAGAGATACAGGGAGCAGGACAAACTAAAGAAGAAAATCCGGAGGCATGCGGAATCCTGA
Protein:  
MATDSGANEQSHKSHRSRQSGASAKKKSKDKNKNQNSDPKQQNPKAFAFRSNAKAKRLQSRAVEKEQRKLHLPVIDRSYGEPPPFVVVVQGPPQVGKSLVIKSLVKHYTKHNLPEVRGPITIVSGKQRRLQFVECPNDINGMIDAAKFADLALLLIDGSYGFEMETFEFLNILQVHGFPKVMGVLTHLDKFKDVKKLKKTKQRLKHRFWTEIYDGAKLFYLSGLIHGKYPKREIHNLARFISVMKFPPLSWRVSHPYILVDRLEDVTPPDRVQKNNKCDRNITLYGYLRGCNLKRGTKVHIAGVGDFSLAGVTGLSDPCPLPSAAKKKGLRDKEKLFYAPMSGLGDLLYDKDAVYININDHLVQYSKVDEMDGTTRKGKERDVGEALVKSLQNIKNPIDEKLEKSKISLFRQNPNGSLEIEVGEKDSDEAPEHVRHIEPIEEYQPGKDGSADSDLDGSMSSDQDDGVQEEAMLKSEGSDTDEETTASEQPGQIVEQGMNEESADDEEDEPDGTYEDDGSNEDTQSISGSEFSDGDNEDLNSDDGGLGNISKWKTSLLERAAKKQNINLMQLVYGKSSSTSNTSHEVQDDSENEGSDDDEFFKPKGEWKKNLKEGLDTDNINAEDCSKSTNYLELKNWKEEEVYKSVRNRFVTGDWSKGALRNQLSQSKTEEEDEDVYGDFEDLETGEKYETHQNDDASQKEDDASHKEDDAANEERKMKKLARQEETDTKNGVKNDRSQANASEYYDKLKEEIELQKQMNIAELNDLDEATRLEIEGFRTGMYLRLEVHDVPFEMVEYFDPCHPILVGGIGLGEENVGYMQTRLKRHRWHKKVLKTRDPIIVSIGWRRYQTTPVYAIEDQNGRHRMLKYTPEHMHCLAMFWGPLAPPKTGVLAVQNLSNNLVIFLLILNNFHVEIYFLVKNMEQASFRIIATGYVLESNHAARIVKKIKLVGYPCKIFKKTALIKDMFTSDLEVARFEGAAIRTVSGIRGQVKKAAKEEIGNKPKKKGGQAREGIARCTFEDRILMSDIVFLRAWTQVEVPQFYNPLTTSLQPRQKTWQGMKTVAELRREHNLPIPVNKDSLYKPIERKPRKFNPLVIPKALQANLPFASKPKDIPSRKRPLLEDRRAVVMEPHERKVHALVQHLQLIRSDKMKKRKLKEEQKRKQLEAQRAKDEQVLRKRRREERQERYREQDKLKKKIRRHAES